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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5876708_5877259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5876708 - 5877259

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAGCAG

5'SS Class:

major

3'SS Sequence:

GGCATCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

GGCCACTCACCT

Flanking Amino Acid:

PATAVGTPLIGIYFVVCMAL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

44.7

Major BPS

64.9

0.37

29.8

Major PPT

65.2

0.34

0.9

57.7

38.4

Minor 5ss

28.4

-2.5

3.5

37.7

47.1

Minor BPS

43.2

-0.4

1.9

56.65

44.9

Associated Gene:

Gene:

HTR3A

Ensembl Gene ID:

ENSAPLG00000002673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027308

5876560 - 5878270

1711

ENSAPLT00000002712

5873567 - 5878682

5116