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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5980816_5980960_R

Intron Information:

Intron Rank:

134930

Intron Class:

major

Intron Phase:

Intron Coordinates:

5980816 - 5980960

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTATCCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

73.8

0.59

1.3

72.8

Major PPT

79.4

0.66

0.9

73.2

37.2

Minor 5ss

-1.8

2.9

40.9

39.4

Minor BPS

60.6

0.41

1.8

77.76

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041183

5977625 - 5989142

11518

ENSAPLT00000024604

5977625 - 5982412

4788