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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5981108_5981578_R

Intron Information:

Intron Rank:

134931

Intron Class:

major

Intron Phase:

Intron Coordinates:

5981108 - 5981578

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGGTTC

5'SS Class:

major

3'SS Sequence:

TTTATTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CAGCATTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.6

38.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

85.4

0.8

0.7

81.7

30.1

Minor 5ss

42.6

-0.8

3.3

55.4

43.3

Minor BPS

-0.3

1.7

55.04

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024604

5977625 - 5982412

4788