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Intron Name: Anas_platyrhynchos_platyrhynchos_25_5997061_5997358_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5997061 - 5997358

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCGCCG

5'SS Class:

weak_major

3'SS Sequence:

TCTTGATCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCCCGCTTAACG

Flanking Amino Acid:

EELIFELFHQAGPVIKVKIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

45.1

44.4

Major BPS

83.8

0.84

73.6

41.8

Major PPT

75.8

0.58

0.9

69.8

35.6

Minor 5ss

30.1

-2.3

3.4

39.4

Minor BPS

56.6

0.07

1.9

60.38

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005353

5996965 - 5999744

2780