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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6000952_6001176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6000952 - 6001176

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGGAA

U12 Branch Point Sequence:

TTTGGGTTACCT

Flanking Amino Acid:

TDCDLNVLAEGPNLIINQPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.4

40.3

Major BPS

45.2

-0.3

1.4

39.7

40.4

Major PPT

79.1

0.66

0.7

25.2

Minor 5ss

34.3

-1.8

2.8

40.4

45.5

Minor BPS

45.7

-0.2

2.6

47.8

Associated Gene:

Gene:

REXO2

Ensembl Gene ID:

ENSAPLG00000005045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005222

6000620 - 6006571

5952