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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6001255_6003260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6001255 - 6003260

Intron Length:

2006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATATATATAATT

Flanking Amino Acid:

SEWCKEHHGKSGLTKAVKES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

77.5

32.9

Major BPS

0.72

78.4

31.2

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

34.2

-1.8

2.9

42.1

Minor BPS

53.7

0.19

1.7

73.35

37.3

Associated Gene:

Gene:

REXO2

Ensembl Gene ID:

ENSAPLG00000005045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005222

6000620 - 6006571

5952