Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_6051359_6051987_F

Intron Information:

Intron Rank:

131433

Intron Class:

major

Intron Phase:

Intron Coordinates:

6051359 - 6051987

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCATGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

GTTTCCTCATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

70.9

0.47

72.5

31.5

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

50.3

0.01

2.1

68.51

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046263

6050522 - 6052342

1821