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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6083868_6105321_R

Intron Information:

Intron Rank:

149566

Intron Class:

major

Intron Phase:

Intron Coordinates:

6083868 - 6105321

Intron Length:

21454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TATATATTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

81.9

0.72

0.8

79.8

32.1

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

49.3

0.03

1.9

70.65

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043007

6083193 - 6106163

22971