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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6084202_6105321_R

Intron Information:

Intron Rank:

149563

Intron Class:

major

Intron Phase:

Intron Coordinates:

6084202 - 6105321

Intron Length:

21120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGTCTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.2

0.7

0.9

81.3

36.3

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

68.7

0.67

1.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031869

6083993 - 6106163

22171