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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6119644_6119739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6119644 - 6119739

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCATCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TGCTCATCATTT

Flanking Amino Acid:

SVALHPDSRAGRYFARHKGT

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

73.1

0.52

0.8

70.3

34.9

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

46.7

-0.1

66.22

44.4

Associated Gene:

Gene:

CADM1

Ensembl Gene ID:

ENSAPLG00000004955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034751

6118506 - 6244313

125808