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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6119752_6151971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6119752 - 6151971

Intron Length:

32220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGTGAG

5'SS Class:

major

3'SS Sequence:

CTAATCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTAATCTCAACA

Flanking Amino Acid:

SHADYMLFVYDSRAGEEGSI

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

63.8

42.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.9

0.4

62.5

38.2

Minor 5ss

31.4

-2.1

3.3

40.1

45.9

Minor BPS

56.6

0.2

1.6

41.1

Associated Gene:

Gene:

CADM1

Ensembl Gene ID:

ENSAPLG00000004955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036653

6117506 - 6296444

178939