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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6130307_6136635_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6130307 - 6136635

Intron Length:

6329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTGGTATC

5'SS Class:

major

3'SS Sequence:

TTTTACTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACTT

Flanking Amino Acid:

TTATTEPAVHGFTQLPNSAE

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.3

68.6

42.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

69.7

0.44

1.2

Minor 5ss

35.7

-1.6

47.6

41.1

Minor BPS

63.3

0.5

1.6

78.42

39.1

Associated Gene:

Gene:

CADM1

Ensembl Gene ID:

ENSAPLG00000004955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034751

6118506 - 6244313

125808

ENSAPLT00000034490

6118506 - 6280217

161712

ENSAPLT00000030547

6118506 - 6262502

143997

ENSAPLT00000039866

6118506 - 6296444

177939

ENSAPLT00000005135

6118506 - 6263765

145260

ENSAPLT00000037033

6117727 - 6262502

144776