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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6136669_6166721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6136669 - 6166721

Intron Length:

30053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCCCGTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

CTTCCTCCAATC

Flanking Amino Acid:

LQTQRYLEVMYTTATTEPAV

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

65.2

40.8

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

69.5

0.44

0.9

64.9

36.3

Minor 5ss

32.6

-2

2.7

37.6

Minor BPS

47.4

-0.2

1.8

60.61

Associated Gene:

Gene:

CADM1

Ensembl Gene ID:

ENSAPLG00000004955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039866

6118506 - 6296444

177939