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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6155299_6166721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6155299 - 6166721

Intron Length:

11423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTTGTCATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AATTTATGAAAT

Flanking Amino Acid:

LQTQRYLEVMYKPQVRVSQN

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

65.2

40.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

82.8

0.74

0.9

35.5

Minor 5ss

32.6

-2

2.7

37.6

Minor BPS

50.2

0.09

1.8

71.33

38.5

Associated Gene:

Gene:

CADM1

Ensembl Gene ID:

ENSAPLG00000004955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034751

6118506 - 6244313

125808

ENSAPLT00000034490

6118506 - 6280217

161712

ENSAPLT00000030547

6118506 - 6262502

143997

ENSAPLT00000037033

6117727 - 6262502

144776

ENSAPLT00000005135

6118506 - 6263765

145260

ENSAPLT00000036653

6117506 - 6296444

178939