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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6399073_6401058_R

Intron Information:

Intron Rank:

145706

Intron Class:

major

Intron Phase:

Intron Coordinates:

6399073 - 6401058

Intron Length:

1986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

TCTGCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ATTAAAATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.8

30.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

86.4

0.82

0.8

84.1

30.8

Minor 5ss

44.4

-0.6

2.9

64.1

41.5

Minor BPS

41.1

-0.6

2.1

62.82

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025092

6398709 - 6401921

3213