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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6681704_6682629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6681704 - 6682629

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGACCG

5'SS Class:

major

3'SS Sequence:

CTTCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTGTTCTGAAAA

Flanking Amino Acid:

NGELENIKPKVIVVWVGTNN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

60.1

44.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

81.8

0.72

0.7

76.7

25.3

Minor 5ss

31.2

-2.1

3.2

40.1

45.5

Minor BPS

63.6

0.42

1.5

73.28

38.2

Associated Gene:

Gene:

PAFAH1B2

Ensembl Gene ID:

ENSAPLG00000019483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020352

6681551 - 6685029

3479