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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6688312_6688860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6688312 - 6688860

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAG

U12 Branch Point Sequence:

TGCCCGGCCACA

Flanking Amino Acid:

AFNHTVLRNRTEGVRVSVNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

39.5

-0.6

1.5

42.6

40.5

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

32.8

-1.3

2.7

45.34

43.6

Associated Gene:

Gene:

SIDT2

Ensembl Gene ID:

ENSAPLG00000015640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021407

6688111 - 6694519

6409

ENSAPLT00000016299

6688111 - 6694466

6356

ENSAPLT00000046219

6688111 - 6694519

6409

ENSAPLT00000041877

6688111 - 6694519

6409