Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_6693541_6693830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6693541 - 6693830

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

CCTGCCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

CTGAGCTGACCC

Flanking Amino Acid:

LVMGNIINWSLAAYGLIVHP

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

64.5

35.3

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

70.7

0.47

0.8

61.2

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

42.5

-0.5

2.1

51.45

45.5

Associated Gene:

Gene:

SIDT2

Ensembl Gene ID:

ENSAPLG00000015640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021407

6688111 - 6694519

6409

ENSAPLT00000046219

6688111 - 6694519

6409

ENSAPLT00000041877

6688111 - 6694519

6409