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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6700427_6700616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6700427 - 6700616

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TCCTCCTCCACA

Flanking Amino Acid:

HYTVTANTLKTLLLLGCFAV

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.8

43.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

77.5

0.62

0.7

71.8

26.4

Minor 5ss

-1.6

3.2

46.7

48.6

Minor BPS

54.6

0.14

67.11

45.4

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479