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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6701005_6701204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6701005 - 6701204

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTCCT

5'SS Class:

major

3'SS Sequence:

GTTTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GCTGCTGAGACC

Flanking Amino Acid:

GTYRLVIRDTGDESLRPGTL

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

62.7

43.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

85.5

0.8

77.5

36.9

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

40.5

-0.7

2.2

49.18

42.1

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479