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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6701300_6701388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6701300 - 6701388

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CCCCCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GGCCTCGCAGCT

Flanking Amino Acid:

SLIGTTRSMDSDPNGFTDWT

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.3

58.5

40.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

74.9

0.56

0.7

68.2

25.3

Minor 5ss

36.7

-1.5

2.9

45.1

36.9

Minor BPS

37.9

-0.8

2.1

50.88

42.9

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479