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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6704017_6705010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6704017 - 6705010

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GCATTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

GTGCCCTGCATT

Flanking Amino Acid:

QHIIVFTATKYEDRHAKWDT

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

81.9

0.72

0.9

76.4

37.4

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

48.5

-0

1.9

67.18

43.5

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479