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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6707701_6708497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6707701 - 6708497

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GCGTGCTCACTG

Flanking Amino Acid:

YANSIYTVTIGAVDEMGSMP

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

82.8

0.74

0.7

76.2

32.4

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

40.1

-0.8

2.1

39.51

44.6

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479