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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6710195_6710642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6710195 - 6710642

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

ACTCGTGTCACA

Flanking Amino Acid:

HYQINDIYSCSWGPDDDGKT

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

88.8

0.87

0.6

23.9

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

38.2

-0.9

2.5

50.1

41.7

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037872

6699377 - 6714494

15118

ENSAPLT00000015611

6700016 - 6714494

14479