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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6710734_6712531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6710734 - 6712531

Intron Length:

1798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCCGCTTCAGCC

Flanking Amino Acid:

VGVAYGSRIAGIRVLDGPLT

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

0.85

0.9

39.9

Major PPT

78.6

0.64

0.8

72.3

32.4

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

-0.3

1.8

53.68

44.7

Associated Gene:

Gene:

PCSK7

Ensembl Gene ID:

ENSAPLG00000014909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015611

6700016 - 6714494

14479

ENSAPLT00000037872

6699377 - 6714494

15118