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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6725457_6725760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6725457 - 6725760

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

TCTTCCCCCATC

Flanking Amino Acid:

TPTLPPPPSETDFMLTAFQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

48.9

-0

1.3

39.1

Major PPT

92.3

0.95

0.6

92.1

18.5

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

46.2

-0.3

2.2

63.04

42.9

Associated Gene:

Gene:

RNF214

Ensembl Gene ID:

ENSAPLG00000014756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015379

6724686 - 6727600

2915