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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6728290_6731389_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

6728290 - 6731389

Intron Length:

3100

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

GAC|ATATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

TGAGCTGCAGCAC|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

TTATCCTGAGCT

Flanking Amino Acid:

RRDHDDFADDSQICSRPSAP

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

31.1

-1.1

3.4

44.1

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

35.4

-0.8

3.1

42.1

Minor 5ss

87.2

1.24

1.3

84.9

32.8

Minor BPS

68.4

0.66

1.7

86.43

38.9

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038142

6727694 - 6734327

6634