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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6731614_6731726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6731614 - 6731726

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CTCCTGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

CCACACTGAGCA

Flanking Amino Acid:

RIGFAVSACHVHDEFRTAAV

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

71.2

0.48

0.8

64.8

30.8

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

-0.5

1.8

47.88

41.6

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014965

6731338 - 6742028

10691

ENSAPLT00000038142

6727694 - 6734327

6634