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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6731899_6731989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6731899 - 6731989

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

TGGGCCGGAGCT

Flanking Amino Acid:

QSFRITILPQQYLRPVEDVA

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

50.1

1.4

43.2

Major PPT

72.6

0.51

67.8

37.6

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

42.2

-0.5

2.3

61.44

47.8

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038142

6727694 - 6734327

6634

ENSAPLT00000014965

6731338 - 6742028

10691