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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6732140_6732253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6732140 - 6732253

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCAGTGTG

5'SS Class:

major

3'SS Sequence:

TCCCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GCCCGCTCACCT

Flanking Amino Acid:

AVKSIKTASSTEKFPDGFWL

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

67.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

74.2

0.55

0.7

68.7

Minor 5ss

32.2

-2

3.2

41.9

44.6

Minor BPS

41.5

-0.5

2.1

53.98

47.1

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038142

6727694 - 6734327

6634

ENSAPLT00000014965

6731338 - 6742028

10691