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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6732806_6732929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6732806 - 6732929

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCACCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CTGTCCCCACCG

Flanking Amino Acid:

EALAAVGGSMIIGGIDRSLY

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

65.8

0.36

0.9

58.6

31.4

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

-0.5

2.2

52.05

48.1

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038142

6727694 - 6734327

6634

ENSAPLT00000014965

6731338 - 6742028

10691