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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6733068_6733282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6733068 - 6733282

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

TCTGCTTTTCTC

Flanking Amino Acid:

LGLAYAEIARPDDSLEPFFD

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

52.1

0.05

1.2

37.5

Major PPT

68.6

0.42

0.9

61.7

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

38.1

-0.9

3.5

57.19

42.6

Associated Gene:

Gene:

BACE1

Ensembl Gene ID:

ENSAPLG00000014327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038142

6727694 - 6734327

6634

ENSAPLT00000014965

6731338 - 6742028

10691