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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6774812_6775044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6774812 - 6775044

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

GATCCCTTTATT

Flanking Amino Acid:

MSSASLGQPKFDLRTEQQVG

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

71.4

0.48

66.1

40.8

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

62.7

0.48

1.6

75.68

40.8

Associated Gene:

Gene:

CEP164

Ensembl Gene ID:

ENSAPLG00000013961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031193

6741475 - 6776885

35411

ENSAPLT00000044253

6741475 - 6777592

36118

ENSAPLT00000022437

6741475 - 6777748

36274

ENSAPLT00000044198

6741475 - 6777748

36274

ENSAPLT00000014590

6741475 - 6778866

37392

ENSAPLT00000038672

6741475 - 6777748

36274

ENSAPLT00000034387

6741475 - 6777748

36274