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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6783283_6783546_F

Intron Information:

Intron Rank:

125034

Intron Class:

major

Intron Phase:

Intron Coordinates:

6783283 - 6783546

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTCACCCTGACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

75.1

35.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.2

0.57

0.9

66.4

39.4

Minor 5ss

33.7

-1.9

3.2

40.4

Minor BPS

49.4

-0.1

1.9

56.16

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031876

6782838 - 6784309

1472