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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6805297_6808546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6805297 - 6808546

Intron Length:

3250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAG

U12 Branch Point Sequence:

CTCCCCTCCACA

Flanking Amino Acid:

ISQSVHVTVKVPPLIQPFEF

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

47.5

-0.1

1.6

60.7

45.9

Major PPT

74.1

0.54

0.7

67.8

25.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

48.4

-0.1

60.78

45.1

Associated Gene:

Gene:

DSCAML1

Ensembl Gene ID:

ENSAPLG00000012775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013386

6795405 - 6819141

23737