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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6903297_6903380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6903297 - 6903380

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

AGCACCTGACCC

Flanking Amino Acid:

LLSWIYSKMESEND*

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

60.1

0.25

35.6

Major PPT

82.6

0.73

0.7

76.6

25.4

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

47.6

-0.2

1.8

55.41

42.3

Associated Gene:

Gene:

TMPRSS13

Ensembl Gene ID:

ENSAPLG00000012108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012630

6903282 - 6909672

6391