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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6903761_6903906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6903761 - 6903906

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CGAGGCTCACCC

Flanking Amino Acid:

TGFGKTRENEENTSPKLREA

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

52.1

0.05

1.3

41.8

Major PPT

79.4

0.66

0.8

72.7

32.1

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

39.1

-0.8

2.1

43.69

43.8

Associated Gene:

Gene:

TMPRSS13

Ensembl Gene ID:

ENSAPLG00000012108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012630

6903282 - 6909672

6391