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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6904415_6904509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6904415 - 6904509

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CCCCTGCTAATT

Flanking Amino Acid:

WVLTAAHCFFMNSMKILDDW

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

69.9

0.45

0.8

60.4

29.4

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

40.8

-0.6

2.2

52.59

43.2

Associated Gene:

Gene:

TMPRSS13

Ensembl Gene ID:

ENSAPLG00000012108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012630

6903282 - 6909672

6391