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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6905133_6905228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6905133 - 6905228

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATTCCT

5'SS Class:

major

3'SS Sequence:

TCTCTCCTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GTGGTCTCACCG

Flanking Amino Acid:

RKTCRQLGFQNASQTEYVPL

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

81.7

0.71

0.7

76.6

25.3

Minor 5ss

38.6

-1.3

52.2

38.2

Minor BPS

44.1

-0.5

1.9

47.42

45.8

Associated Gene:

Gene:

TMPRSS13

Ensembl Gene ID:

ENSAPLG00000012108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012630

6903282 - 6909672

6391