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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6915664_6915980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6915664 - 6915980

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCGGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

CTCGCCTGATGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

74.7

29.7

Major BPS

0.27

1.3

53.3

44.2

Major PPT

70.3

0.46

0.9

62.4

39.2

Minor 5ss

33.4

-1.9

2.8

39.2

46.2

Minor BPS

42.9

-0.5

50.27

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012523

6915625 - 6918666

3042