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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6916390_6916607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6916390 - 6916607

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCGTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CGCTCTTTAAAA

Flanking Amino Acid:

QRSSSFSPREASLRLSGQSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.54

0.8

64.5

36.6

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

0.4

1.5

64.9

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019822

6914902 - 6918666

3765

ENSAPLT00000012523

6915625 - 6918666

3042