Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_6917308_6917456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6917308 - 6917456

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTGGG

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGGTTCCCAGCT

Flanking Amino Acid:

EQCVTIGRRHRSAELVLNIV

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.1

52.3

Major BPS

0.28

1.1

63.1

35.8

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

33.2

-1.9

3.4

44.1

Minor BPS

45.2

-0.2

65.61

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019822

6914902 - 6918666

3765

ENSAPLT00000012523

6915625 - 6918666

3042