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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6917582_6917682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6917582 - 6917682

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

CTCTCCCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GTGAGGCTAACT

Flanking Amino Acid:

RKSVRPPAVLKNFIKQSSLW

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

62.2

43.7

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

78.1

0.63

0.7

72.5

25.6

Minor 5ss

30.2

-2.3

3.2

35.3

42.3

Minor BPS

40.9

-0.6

2.5

62.1

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019822

6914902 - 6918666

3765

ENSAPLT00000012523

6915625 - 6918666

3042