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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6929771_6930066_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6929771 - 6930066

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCGGCGGAG

5'SS Class:

weak_major

3'SS Sequence:

CGTCTGCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGCT

Flanking Amino Acid:

LQDPASERLNVKAYLEYHYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.3

43.8

41.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

67.8

0.4

0.9

57.8

38.5

Minor 5ss

17.4

-3.8

4.1

27.3

44.4

Minor BPS

45.3

-0.2

2.1

61.44

47.8

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012018

6929737 - 6933170

3434