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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6930220_6930324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6930220 - 6930324

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TGCCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGGAT

U12 Branch Point Sequence:

CAAAGGATGACC

Flanking Amino Acid:

QHVPEGPQAGARVSRDRSIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

47.3

-0.1

1.3

43.5

39.2

Major PPT

76.3

0.59

0.8

69.7

31.1

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

-1.2

2.3

40.86

38.9

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046307

6925563 - 6932708

7146

ENSAPLT00000012018

6929737 - 6933170

3434