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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6930938_6931415_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6930938 - 6931415

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

CGCCCGGCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGCC

U12 Branch Point Sequence:

GCCCGGCCAAAG

Flanking Amino Acid:

SGSVVSLVCSSCGESARTPR

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.4

41.2

Major BPS

29.4

-1.3

4.1

52.4

43.3

Major PPT

48.2

-0.1

42.9

Minor 5ss

38.2

-1.3

2.7

49.6

40.1

Minor BPS

26.4

-1.9

2.1

23.57

35.1

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046307

6925563 - 6932708

7146

ENSAPLT00000012018

6929737 - 6933170

3434