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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6931576_6931801_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6931576 - 6931801

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

TGTCCGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAC

U12 Branch Point Sequence:

GGAGGGTTAACG

Flanking Amino Acid:

GWILTAAHCFKNNPVIPNWR

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

62.5

43.8

Major BPS

56.7

0.17

1.3

61.4

43.2

Major PPT

65.9

0.36

57.2

43.2

Minor 5ss

29.9

-2.3

2.8

32.6

35.8

Minor BPS

41.7

-0.7

2.4

45.48

46.4

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046307

6925563 - 6932708

7146

ENSAPLT00000012018

6929737 - 6933170

3434