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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6932338_6932449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6932338 - 6932449

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GCGTTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CTCTCCTGAGTG

Flanking Amino Acid:

VTGWGYTKEHGKLSETLQQA

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

73.6

0.53

68.6

42.1

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

49.7

-0.1

1.8

55.83

45.9

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012018

6929737 - 6933170

3434