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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6932590_6932828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6932590 - 6932828

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TTGTCCTTCCCA

Flanking Amino Acid:

VPQGGVDTCQGDSGGPLMYL

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

80.7

0.69

0.8

73.2

37.2

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

46.1

-0.3

3.6

74.81

43.1

Associated Gene:

Gene:

TMPRSS4

Ensembl Gene ID:

ENSAPLG00000011505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012018

6929737 - 6933170

3434