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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6937182_6949288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6937182 - 6949288

Intron Length:

12107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAAGCCC

5'SS Class:

major

3'SS Sequence:

TGCTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GTGCCCTCACGC

Flanking Amino Acid:

DGEGNPDEGTKFVRPRHRLG

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

57.5

38.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

69.1

0.43

61.8

39.9

Minor 5ss

33.1

-1.9

3.4

38.2

Minor BPS

43.8

-0.4

52.79

44.4

Associated Gene:

Gene:

SCN2B

Ensembl Gene ID:

ENSAPLG00000011335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011789

6935335 - 6952341

17007